The 2.0 version of rSNPBase

Variant report

Variant rs61834006
Chromosome Location chr1:227203214-227203215
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227154400-227294200 Weak transcription Hela-S3 cervix
2 chr1:227175200-227210200 Weak transcription HMEC breast
3 chr1:227175600-227216200 Weak transcription H9 Cell Line embryonic stem cell
4 chr1:227176000-227216400 Weak transcription NHLF lung
5 chr1:227177400-227255200 Weak transcription Small Intestine intestine
6 chr1:227178400-227271200 Weak transcription Psoas Muscle Psoas
7 chr1:227178600-227206600 Weak transcription Primary hematopoietic stem cells blood
8 chr1:227178600-227226200 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr1:227179400-227204400 Weak transcription Stomach Mucosa stomach
10 chr1:227179400-227215000 Weak transcription Placenta Placenta
11 chr1:227179600-227213800 Weak transcription NH-A brain
12 chr1:227182000-227216000 Weak transcription Colon Smooth Muscle Colon
13 chr1:227182200-227205600 Weak transcription Fetal Brain Male brain
14 chr1:227182600-227206400 Weak transcription Brain Germinal Matrix brain
15 chr1:227182800-227224200 Weak transcription Spleen Spleen
16 chr1:227183200-227228200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr1:227183200-227240400 Weak transcription Colonic Mucosa Colon
18 chr1:227183600-227204600 Weak transcription HepG2 liver
19 chr1:227184000-227204200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr1:227184000-227214600 Weak transcription H1 Cell Line embryonic stem cell
21 chr1:227184000-227234000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:227184200-227206600 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr1:227184600-227208000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr1:227187200-227218600 Weak transcription ES-WA7 Cell Line embryonic stem cell
25 chr1:227189200-227207400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr1:227190600-227206600 Weak transcription Muscle Satellite Cultured Cells --
27 chr1:227190600-227217000 Weak transcription Esophagus oesophagus
28 chr1:227190600-227223200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:227190600-227272600 Weak transcription Lung lung
30 chr1:227191200-227208200 Weak transcription NHEK skin
31 chr1:227191200-227214400 Weak transcription Aorta Aorta
32 chr1:227191400-227204000 Weak transcription NHDF-Ad bronchial
33 chr1:227191600-227206600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr1:227191800-227206400 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr1:227192200-227207000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr1:227192400-227206600 Weak transcription Placenta Amnion Placenta Amnion
37 chr1:227192600-227204200 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr1:227192600-227206000 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr1:227192600-227220200 Weak transcription Rectal Smooth Muscle rectum
40 chr1:227192800-227205000 Weak transcription Fetal Intestine Large intestine
41 chr1:227192800-227206000 Weak transcription Brain Anterior Caudate brain
42 chr1:227192800-227206400 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr1:227192800-227206600 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr1:227192800-227206800 Weak transcription Fetal Heart heart
45 chr1:227192800-227206800 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr1:227192800-227207200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr1:227192800-227208000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr1:227192800-227214200 Weak transcription Right Ventricle heart
49 chr1:227192800-227220200 Weak transcription Gastric stomach
50 chr1:227193000-227208000 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015