Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10863094	0.90[ASN][1000 genomes]
rs11117089	0.90[ASN][1000 genomes]
rs12369468	0.90[ASN][1000 genomes]
rs12370270	0.90[ASN][1000 genomes]
rs2897186	0.90[ASN][1000 genomes]
rs4143239	0.90[ASN][1000 genomes]
rs56224424	1.00[ASN][1000 genomes]
rs61929367	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61929389	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61929399	0.90[ASN][1000 genomes]
rs61929421	0.90[ASN][1000 genomes]
rs61929424	0.90[ASN][1000 genomes]
rs61930913	0.90[ASN][1000 genomes]
rs61930914	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61930921	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61930925	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61930957	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61931135	0.96[AMR][1000 genomes]
rs7132262	0.90[ASN][1000 genomes]
rs7135154	0.90[ASN][1000 genomes]
rs73177142	0.90[ASN][1000 genomes]
rs73177158	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73177167	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73177169	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73187654	0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049179	chr12:86056376-86799188	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	esv1797806	chr12:86198935-86425608	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:86311200-86313800	Weak transcription	Pancreas	Pancrea

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