Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1146883	0.83[ASN][1000 genomes]
rs1146888	0.82[ASN][1000 genomes]
rs1146890	0.94[ASN][1000 genomes]
rs1505139	0.86[EUR][1000 genomes]
rs1505141	0.84[ASN][1000 genomes]
rs1700826	0.91[ASN][1000 genomes]
rs17066099	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1847629	0.92[ASN][1000 genomes]
rs1929731	0.88[ASN][1000 genomes]
rs2657128	0.92[ASN][1000 genomes]
rs2777732	0.83[ASN][1000 genomes]
rs4142608	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4142610	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8001163	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs924894	0.81[ASN][1000 genomes]
rs924895	0.82[ASN][1000 genomes]
rs9318421	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9530536	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9544243	0.90[ASN][1000 genomes]
rs9544244	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9544248	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044736	chr13:76728655-77066435	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:76899200-76911400	Weak transcription	Aorta	Aorta
2	chr13:76899600-76905000	Weak transcription	Colon Smooth Muscle	Colon

Quick Search: