The 2.0 version of rSNPBase

Variant report

Variant rs62183048
Chromosome Location chr2:178648771-178648772
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178647000-178649200 Enhancers HMEC breast
2 chr2:178647200-178650000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
3 chr2:178647400-178649000 Enhancers NHEK skin
4 chr2:178647400-178650200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr2:178647600-178648800 Enhancers Primary T helper naive cells from peripheral blood blood
6 chr2:178647600-178649000 Enhancers Primary T killer memory cells from peripheral blood blood
7 chr2:178647600-178649800 Enhancers Primary T helper cells PMA-I stimulated --
8 chr2:178647600-178650000 Enhancers Breast Myoepithelial Primary Cells Breast
9 chr2:178647600-178650000 Enhancers HSMM muscle
10 chr2:178647800-178649000 Enhancers Muscle Satellite Cultured Cells --
11 chr2:178647800-178649800 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr2:178647800-178650200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr2:178648000-178648800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr2:178648000-178649000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr2:178648000-178650200 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr2:178648200-178648800 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr2:178648200-178649000 Enhancers Primary T regulatory cells fromperipheralblood blood
18 chr2:178648200-178650000 Enhancers Primary T helper cells fromperipheralblood blood
19 chr2:178648200-178650000 Enhancers Sigmoid Colon Sigmoid Colon
20 chr2:178648400-178649000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr2:178648400-178649600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
22 chr2:178648400-178649600 Enhancers Rectal Mucosa Donor 31 rectum
23 chr2:178648400-178649800 Enhancers Primary T cells from cord blood blood
24 chr2:178648400-178650000 Enhancers Primary hematopoietic stem cells short term culture blood
25 chr2:178648400-178650000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
26 chr2:178648400-178650200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
27 chr2:178648600-178648800 Enhancers Adipose Nuclei Adipose
28 chr2:178648600-178648800 Enhancers Osteobl bone
29 chr2:178648600-178649000 Enhancers Primary Natural Killer cells fromperipheralblood blood
30 chr2:178648600-178649000 Enhancers Skeletal Muscle Male skeletal muscle
31 chr2:178648600-178649000 Enhancers NHDF-Ad bronchial
32 chr2:178648600-178649200 Enhancers Colon Smooth Muscle Colon
33 chr2:178648600-178649200 Enhancers HSMMtube muscle
34 chr2:178648600-178649200 Enhancers NH-A brain
35 chr2:178648600-178649400 Enhancers Primary monocytes fromperipheralblood blood
36 chr2:178648600-178649400 Enhancers Primary neutrophils fromperipheralblood blood
37 chr2:178648600-178649400 Enhancers Fetal Thymus thymus
38 chr2:178648600-178649600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr2:178648600-178649600 Enhancers Primary mononuclear cells fromperipheralblood Blood
40 chr2:178648600-178649600 Flanking Active TSS Dnd41 blood
41 chr2:178648600-178649800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
42 chr2:178648600-178649800 Enhancers Primary hematopoietic stem cells blood
43 chr2:178648600-178649800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr2:178648600-178649800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr2:178648600-178649800 Enhancers Thymus Thymus
46 chr2:178648600-178650000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr2:178648600-178650000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr2:178648600-178650000 Enhancers Primary T cells fromperipheralblood blood
49 chr2:178648600-178650000 Enhancers Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015