The 2.0 version of rSNPBase

Variant report

Variant rs62183050
Chromosome Location chr2:178649968-178649969
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178647200-178650000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
2 chr2:178647400-178650200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr2:178647600-178650000 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr2:178647600-178650000 Enhancers HSMM muscle
5 chr2:178647800-178650200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr2:178648000-178650200 Enhancers Primary T killer naive cells fromperipheralblood blood
7 chr2:178648200-178650000 Enhancers Primary T helper cells fromperipheralblood blood
8 chr2:178648200-178650000 Enhancers Sigmoid Colon Sigmoid Colon
9 chr2:178648400-178650000 Enhancers Primary hematopoietic stem cells short term culture blood
10 chr2:178648400-178650000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
11 chr2:178648400-178650200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
12 chr2:178648600-178650000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr2:178648600-178650000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr2:178648600-178650000 Enhancers Primary T cells fromperipheralblood blood
15 chr2:178648600-178650000 Enhancers Rectal Smooth Muscle rectum
16 chr2:178648800-178650000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr2:178648800-178650000 Enhancers Brain Germinal Matrix brain
18 chr2:178648800-178650000 Enhancers K562 blood
19 chr2:178649200-178650000 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
20 chr2:178649200-178650000 Enhancers Skeletal Muscle Female skeletal muscle
21 chr2:178649400-178650000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
22 chr2:178649400-178650000 Enhancers Primary T helper 17 cells PMA-I stimulated --
23 chr2:178649400-178650000 Enhancers Primary Natural Killer cells fromperipheralblood blood
24 chr2:178649400-178650000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr2:178649400-178650000 Enhancers Muscle Satellite Cultured Cells --
26 chr2:178649400-178650000 Enhancers Rectal Mucosa Donor 29 rectum
27 chr2:178649400-178650000 Enhancers Small Intestine intestine
28 chr2:178649400-178650200 Enhancers Skeletal Muscle Male skeletal muscle
29 chr2:178649400-178662000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr2:178649600-178650000 Enhancers Primary T killer memory cells from peripheral blood blood
31 chr2:178649600-178650000 Enhancers NHDF-Ad bronchial
32 chr2:178649600-178650000 Enhancers NHEK skin
33 chr2:178649600-178650200 Enhancers Dnd41 blood
34 chr2:178649600-178650200 Enhancers HMEC breast
35 chr2:178649800-178650000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr2:178649800-178650000 Enhancers Primary T helper naive cells from peripheral blood blood
37 chr2:178649800-178650000 Flanking Active TSS Adipose Nuclei Adipose
38 chr2:178649800-178650000 Enhancers Colon Smooth Muscle Colon
39 chr2:178649800-178650000 Enhancers Osteobl bone
40 chr2:178649800-178650200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015