Variant report
| Variant | rs62270387 |
|---|---|
| Chromosome Location | chr3:159512689-159512690 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:159493600-159516200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr3:159502000-159522800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 3 | chr3:159504000-159518600 | Enhancers | Brain Hippocampus Middle | brain |
| 4 | chr3:159504200-159518400 | Enhancers | Brain Substantia Nigra | brain |
| 5 | chr3:159505000-159515000 | Enhancers | Brain Angular Gyrus | brain |
| 6 | chr3:159505600-159515600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 7 | chr3:159506000-159518200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 8 | chr3:159506200-159522600 | Weak transcription | Fetal Kidney | kidney |
| 9 | chr3:159506400-159513200 | Weak transcription | NHLF | lung |
| 10 | chr3:159506400-159513800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 11 | chr3:159506400-159522400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 12 | chr3:159506600-159514200 | Weak transcription | Fetal Heart | heart |
| 13 | chr3:159506800-159513000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 14 | chr3:159507000-159513600 | Weak transcription | NH-A | brain |
| 15 | chr3:159508000-159513800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 16 | chr3:159508000-159513800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 17 | chr3:159508000-159514000 | Weak transcription | HMEC | breast |
| 18 | chr3:159508600-159520600 | Enhancers | Brain Cingulate Gyrus | brain |
| 19 | chr3:159509000-159516600 | Weak transcription | Liver | Liver |
| 20 | chr3:159509200-159515000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 21 | chr3:159509200-159516600 | Weak transcription | HepG2 | liver |
| 22 | chr3:159509400-159513600 | Weak transcription | Lung | lung |
| 23 | chr3:159509400-159513800 | Enhancers | Colon Smooth Muscle | Colon |
| 24 | chr3:159509400-159514000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 25 | chr3:159509400-159515600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 26 | chr3:159509400-159517200 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 27 | chr3:159509600-159513800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 28 | chr3:159509600-159514000 | Weak transcription | NHEK | skin |
| 29 | chr3:159510200-159513000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 30 | chr3:159510200-159513000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 31 | chr3:159510200-159513000 | Weak transcription | Osteobl | bone |
| 32 | chr3:159510200-159513800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 33 | chr3:159510200-159513800 | Weak transcription | HSMM | muscle |
| 34 | chr3:159510200-159516200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 35 | chr3:159510400-159512800 | Weak transcription | NHDF-Ad | bronchial |
| 36 | chr3:159510800-159513600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 37 | chr3:159511000-159512800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 38 | chr3:159511000-159513000 | Weak transcription | Right Ventricle | heart |
| 39 | chr3:159511000-159514400 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 40 | chr3:159511800-159514000 | Weak transcription | A549 | lung |
| 41 | chr3:159512200-159514400 | Enhancers | Aorta | Aorta |
| 42 | chr3:159512200-159515800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 43 | chr3:159512200-159516200 | Enhancers | Brain Anterior Caudate | brain |
| 44 | chr3:159512400-159513400 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 45 | chr3:159512400-159514000 | Weak transcription | HUVEC | blood vessel |
| 46 | chr3:159512400-159514400 | Enhancers | Left Ventricle | heart |
| 47 | chr3:159512400-159514400 | Enhancers | Right Atrium | heart |
| 48 | chr3:159512400-159517600 | Enhancers | Adipose Nuclei | Adipose |
| 49 | chr3:159512600-159512800 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 50 | chr3:159512600-159513000 | Enhancers | Fetal Stomach | stomach |
