Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:100837034..100839594-chr3:100842737..100844659,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10470492	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12696268	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12696269	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13061852	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13084083	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13085315	0.96[EUR][1000 genomes]
rs13085362	0.92[EUR][1000 genomes]
rs13099410	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13099994	0.96[EUR][1000 genomes]
rs1876414	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34262121	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34452520	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34673745	0.87[EUR][1000 genomes]
rs35628033	0.96[EUR][1000 genomes]
rs35783841	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35865760	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35904383	0.94[EUR][1000 genomes]
rs59729034	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62274080	0.96[EUR][1000 genomes]
rs62280585	0.94[EUR][1000 genomes]
rs9833449	0.87[EUR][1000 genomes]
rs9917836	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931417	chr3:100547347-101183844	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv877222	chr3:100715576-101038297	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv877223	chr3:100817043-100871443	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:100836600-100839000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr3:100837800-100838600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr3:100837800-100838800	Enhancers	NHLF	lung
4	chr3:100837800-100839200	Enhancers	Osteobl	bone
5	chr3:100838000-100839000	Enhancers	Muscle Satellite Cultured Cells	--
6	chr3:100838200-100838600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr3:100838200-100838800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr3:100838200-100838800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr3:100838200-100838800	Enhancers	HSMM	muscle
10	chr3:100838200-100839000	Enhancers	NHDF-Ad	bronchial
11	chr3:100838400-100838800	Enhancers	NH-A	brain

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