The 2.0 version of rSNPBase

Variant report

Variant rs62305271
Chromosome Location chr4:56375882-56375883
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:56314400-56377200 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr4:56332600-56377800 Weak transcription Gastric stomach
3 chr4:56336000-56376800 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr4:56337400-56377000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr4:56341400-56385600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr4:56341600-56377000 Weak transcription H9 Cell Line embryonic stem cell
7 chr4:56341800-56376400 Weak transcription Brain Substantia Nigra brain
8 chr4:56341800-56376800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr4:56342200-56377600 Weak transcription Stomach Smooth Muscle stomach
10 chr4:56342400-56376600 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr4:56342400-56378200 Weak transcription Brain Cingulate Gyrus brain
12 chr4:56342800-56391400 Weak transcription Psoas Muscle Psoas
13 chr4:56344600-56378200 Weak transcription Brain Germinal Matrix brain
14 chr4:56355400-56377000 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr4:56355400-56377000 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr4:56355400-56377200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr4:56355400-56377400 Weak transcription Brain Anterior Caudate brain
18 chr4:56355400-56378000 Weak transcription Aorta Aorta
19 chr4:56355400-56379200 Weak transcription Ovary ovary
20 chr4:56355400-56379200 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr4:56355400-56380800 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr4:56355400-56381800 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr4:56355400-56386200 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr4:56355600-56377000 Weak transcription Primary monocytes fromperipheralblood blood
25 chr4:56355600-56377000 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr4:56355800-56376000 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr4:56355800-56376000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr4:56356800-56376800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr4:56361200-56387400 Weak transcription Left Ventricle heart
30 chr4:56361400-56377000 Weak transcription Primary B cells from peripheral blood blood
31 chr4:56361400-56381000 Weak transcription Fetal Brain Male brain
32 chr4:56361600-56377200 Weak transcription Adipose Nuclei Adipose
33 chr4:56361600-56411800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr4:56361800-56384400 Weak transcription Primary B cells from cord blood blood
35 chr4:56362000-56377200 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr4:56364600-56376800 Weak transcription Rectal Smooth Muscle rectum
37 chr4:56366200-56376600 Weak transcription Esophagus oesophagus
38 chr4:56366200-56376600 Weak transcription Monocytes-CD14+_RO01746 blood
39 chr4:56366200-56377000 Weak transcription Spleen Spleen
40 chr4:56366200-56377200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr4:56366200-56377200 Weak transcription Lung lung
42 chr4:56366200-56377600 Weak transcription Liver Liver
43 chr4:56366200-56386400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr4:56366800-56377400 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr4:56368600-56377000 Weak transcription Right Ventricle heart
46 chr4:56369400-56376200 Weak transcription Fetal Thymus thymus
47 chr4:56369600-56376800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr4:56369600-56377000 Weak transcription Fetal Lung lung
49 chr4:56370000-56377000 Weak transcription HUVEC blood vessel
50 chr4:56370000-56379200 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015