Variant report

Variant	rs62374671
Chromosome Location	chr5:124682607-124682608
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs17465113	0.83[EUR][1000 genomes]
rs62374665	0.83[EUR][1000 genomes]
rs62374669	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs62374670	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs62374673	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62374685	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62374686	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62374687	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62374698	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62374716	0.81[EUR][1000 genomes]
rs62374718	0.83[EUR][1000 genomes]
rs62374720	0.83[EUR][1000 genomes]
rs62374721	0.83[EUR][1000 genomes]
rs62374724	0.83[EUR][1000 genomes]
rs62374725	0.83[EUR][1000 genomes]
rs62374727	0.83[EUR][1000 genomes]
rs62374730	0.81[EUR][1000 genomes]
rs62374731	0.81[EUR][1000 genomes]

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:124673200-124683800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr5:124673400-124683200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr5:124679000-124684000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr5:124679200-124684800	Weak transcription	NH-A	brain
5	chr5:124679400-124684200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr5:124679600-124684600	Weak transcription	HSMMtube	muscle
7	chr5:124681200-124682800	Enhancers	Fetal Lung	lung
8	chr5:124681600-124683600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr5:124681800-124682800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr5:124681800-124684000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr5:124681800-124684000	Enhancers	Brain Hippocampus Middle	brain
12	chr5:124681800-124684400	Enhancers	Cortex derived primary cultured neurospheres	brain
13	chr5:124682000-124683200	Enhancers	Brain Angular Gyrus	brain
14	chr5:124682000-124683400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
15	chr5:124682000-124683600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr5:124682000-124684000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr5:124682000-124684000	Enhancers	Brain Germinal Matrix	brain
18	chr5:124682000-124684600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr5:124682200-124683800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr5:124682200-124684000	Enhancers	Brain Inferior Temporal Lobe	brain
21	chr5:124682200-124684000	Enhancers	Fetal Brain Male	brain
22	chr5:124682200-124685600	Enhancers	Fetal Stomach	stomach
23	chr5:124682400-124682800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr5:124682400-124683400	Weak transcription	HUES48 Cell Line	embryonic stem cell
25	chr5:124682400-124683800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr5:124682600-124682800	Enhancers	Brain Anterior Caudate	brain
27	chr5:124682600-124682800	Enhancers	Brain Cingulate Gyrus	brain
28	chr5:124682600-124683000	Active TSS	Brain Substantia Nigra	brain
29	chr5:124682600-124683800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
30	chr5:124682600-124684200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr5:124682600-124684200	Weak transcription	NHLF	lung
32	chr5:124682600-124684600	Enhancers	Fetal Muscle Leg	muscle

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