Variant report

Variant	rs62392355
Chromosome Location	chr5:145217933-145217934
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10055406	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10079977	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12658784	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13359571	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1432768	0.83[EUR][1000 genomes]
rs28457816	0.83[EUR][1000 genomes]
rs28516482	0.82[EUR][1000 genomes]
rs6860802	0.82[EUR][1000 genomes]
rs722714	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:145215800-145219600	Weak transcription	NHEK	skin
2	chr5:145215800-145221200	Weak transcription	Psoas Muscle	Psoas
3	chr5:145216000-145219800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr5:145216000-145227200	Weak transcription	Placenta Amnion	Placenta Amnion
5	chr5:145217000-145219000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
6	chr5:145217400-145218200	Enhancers	Fetal Intestine Small	intestine
7	chr5:145217400-145221600	Enhancers	K562	blood
8	chr5:145217600-145218600	Enhancers	Stomach Mucosa	stomach
9	chr5:145217600-145218800	Enhancers	Fetal Intestine Large	intestine
10	chr5:145217800-145218000	Enhancers	Right Atrium	heart
11	chr5:145217800-145218200	Enhancers	HepG2	liver
12	chr5:145217800-145218400	Enhancers	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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