Variant report

Variant	rs722714
Chromosome Location	chr5:145226615-145226616
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10055406	0.93[CEU][hapmap];0.85[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10079977	1.00[CEU][hapmap];0.85[CHB][hapmap];0.80[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12658784	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13359571	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1432768	0.92[CEU][hapmap];1.00[YRI][hapmap];0.88[EUR][1000 genomes]
rs28457816	0.88[EUR][1000 genomes]
rs28516482	0.87[EUR][1000 genomes]
rs62392355	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6860802	0.86[ASW][hapmap];0.92[CEU][hapmap];0.88[GIH][hapmap];0.89[MKK][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.87[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:145216000-145227200	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr5:145225400-145227000	Enhancers	Fetal Heart	heart
3	chr5:145225400-145234400	Weak transcription	Gastric	stomach
4	chr5:145225600-145232600	Weak transcription	Aorta	Aorta
5	chr5:145225800-145226800	Enhancers	Stomach Mucosa	stomach
6	chr5:145225800-145227000	Weak transcription	K562	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links