Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11965010	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12055765	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12173946	0.82[ASN][1000 genomes]
rs2220290	0.81[ASN][1000 genomes]
rs4707934	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60502272	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62407661	0.82[ASN][1000 genomes]
rs62408732	0.84[ASN][1000 genomes]
rs9341336	0.82[ASN][1000 genomes]
rs9342866	0.93[ASN][1000 genomes]
rs9342868	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9350422	0.82[ASN][1000 genomes]
rs9351843	0.81[ASN][1000 genomes]
rs9351847	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9358968	0.82[ASN][1000 genomes]
rs9358970	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9358971	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9360480	0.82[ASN][1000 genomes]
rs9360481	0.82[ASN][1000 genomes]
rs9360482	0.82[ASN][1000 genomes]
rs9360484	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs9360487	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830686	chr6:72336896-72534267	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:72421000-72443400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr6:72435200-72439200	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr6:72437200-72440400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr6:72437400-72439800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr6:72438000-72443400	Weak transcription	NHDF-Ad	bronchial
6	chr6:72438200-72439200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr6:72438200-72443400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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