Variant report

Variant	rs9360484
Chromosome Location	chr6:72415949-72415950
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10942957	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11965010	0.81[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs12055765	0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs12173946	0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12211666	0.92[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2200527	0.85[EUR][1000 genomes]
rs2220290	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2220291	0.86[CEU][hapmap];0.91[JPT][hapmap]
rs4707934	0.97[ASN][1000 genomes]
rs60502272	0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs62404298	0.85[AMR][1000 genomes]
rs62407661	0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62407672	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs62408732	0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9341336	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9342864	0.91[JPT][hapmap]
rs9342866	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9342868	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs9350422	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9351841	0.86[CEU][hapmap];0.91[JPT][hapmap]
rs9351843	0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9351847	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs9358968	0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9358970	0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs9358971	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs9360480	0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9360481	0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9360482	0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9360487	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830686	chr6:72336896-72534267	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:72415400-72416400	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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