Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs12661401	0.81[EUR][1000 genomes]
rs12664780	0.97[ASN][1000 genomes]
rs13218156	0.80[EUR][1000 genomes]
rs17062700	0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1878551	0.81[EUR][1000 genomes]
rs2327350	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2327361	0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35428547	0.91[EUR][1000 genomes]
rs55786252	0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62427512	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62427514	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62427515	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62427516	0.98[EUR][1000 genomes]
rs62429273	0.82[EUR][1000 genomes]
rs6569885	0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6907934	0.92[EUR][1000 genomes]
rs7452066	0.93[EUR][1000 genomes]
rs7765837	0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7774642	0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9493666	0.89[EUR][1000 genomes]
rs9493669	0.93[EUR][1000 genomes]
rs9493673	0.89[ASN][1000 genomes]
rs9493674	0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9493676	0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886682	chr6:133892208-133943732	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1019267	chr6:133912335-133975187	Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133912400-133925200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:133916000-133925200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr6:133917200-133925200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr6:133923800-133926600	Weak transcription	Fetal Lung	lung

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