Variant report

Variant	rs62535094
Chromosome Location	chr9:15098381-15098382
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10756651	0.93[EUR][1000 genomes]
rs1780160	0.85[EUR][1000 genomes]
rs28723402	0.83[AMR][1000 genomes]
rs56886360	0.85[EUR][1000 genomes]
rs60048952	0.85[EUR][1000 genomes]
rs61300262	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61462769	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62535154	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62535156	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62535157	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62535159	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62537060	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62537126	0.93[EUR][1000 genomes]
rs62537128	0.85[EUR][1000 genomes]
rs62537130	0.85[EUR][1000 genomes]
rs62537131	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs62537135	0.85[EUR][1000 genomes]
rs62537136	0.85[EUR][1000 genomes]
rs62537137	0.85[EUR][1000 genomes]
rs7036854	0.85[EUR][1000 genomes]
rs73642991	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831519	chr9:15018160-15209127	Weak transcription Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv1019567	chr9:15031398-15159409	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv892623	chr9:15079847-15127129	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:15097600-15098600	Weak transcription	Fetal Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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