Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:18882137..18885083-chr7:18886312..18888686,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10230371	0.80[MEX][hapmap]
rs10237149	0.91[GIH][hapmap]
rs10237280	0.89[GIH][hapmap]
rs10237366	0.86[GIH][hapmap]
rs10486314	0.89[GIH][hapmap]
rs12536836	0.95[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap];0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12700003	0.89[GIH][hapmap];0.83[MKK][hapmap]
rs13238389	0.95[CHB][hapmap];0.95[JPT][hapmap];0.95[ASN][1000 genomes]
rs13245206	0.85[CHB][hapmap];0.87[GIH][hapmap];0.81[JPT][hapmap];0.87[MKK][hapmap];0.87[YRI][hapmap];0.82[AFR][1000 genomes]
rs17349860	0.91[GIH][hapmap];0.87[MEX][hapmap]
rs2016515	0.87[GIH][hapmap]
rs2073963	0.91[CHB][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.91[ASN][1000 genomes]
rs2073965	0.92[ASN][1000 genomes]
rs2249817	0.80[MEX][hapmap]
rs3852256	0.86[CHB][hapmap];0.95[JPT][hapmap];0.82[ASN][1000 genomes]
rs6461387	0.87[CEU][hapmap];0.86[GIH][hapmap];0.81[EUR][1000 genomes]
rs6461389	0.86[GIH][hapmap];0.85[JPT][hapmap]
rs6461394	0.89[GIH][hapmap];0.83[LWK][hapmap]
rs6951522	0.95[CHB][hapmap];0.89[GIH][hapmap];0.95[JPT][hapmap];0.83[MEX][hapmap];0.90[ASN][1000 genomes]
rs6951745	0.84[GIH][hapmap]
rs756854	0.88[CEU][hapmap];0.80[CHB][hapmap];0.85[JPT][hapmap];0.81[EUR][1000 genomes]
rs7795433	0.88[ASN][1000 genomes]
rs7811991	0.85[JPT][hapmap]
rs957958	0.91[CHB][hapmap];0.95[JPT][hapmap];0.89[ASN][1000 genomes]
rs957960	0.91[CEU][hapmap];1.00[CHB][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498112	chr7:18677922-18991946	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv887813	chr7:18720135-18995552	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv887814	chr7:18751998-18886177	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:18866800-18885200	Weak transcription	Primary B cells from cord blood	blood
2	chr7:18868800-18887400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr7:18875600-18888000	Weak transcription	Aorta	Aorta
4	chr7:18883600-18883800	Enhancers	NHDF-Ad	bronchial
5	chr7:18883600-18884400	Enhancers	Fetal Heart	heart

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