The 2.0 version of rSNPBase

Variant report

Variant rs6478469
Chromosome Location chr9:100658938-100658939
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100652600-100659600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr9:100652600-100662400 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr9:100652800-100660200 Weak transcription Primary T helper cells fromperipheralblood blood
4 chr9:100652800-100662000 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr9:100652800-100662000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr9:100652800-100666600 Weak transcription Fetal Lung lung
7 chr9:100653000-100660200 Weak transcription Primary T cells fromperipheralblood blood
8 chr9:100653000-100660400 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr9:100653000-100662600 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr9:100653000-100663400 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr9:100653000-100667000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr9:100654200-100666600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr9:100654600-100662400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr9:100656000-100662400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr9:100656000-100662400 Weak transcription Primary B cells from cord blood blood
16 chr9:100656000-100662400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr9:100656000-100662400 Weak transcription Duodenum Mucosa Duodenum
18 chr9:100656000-100662600 Weak transcription Adipose Nuclei Adipose
19 chr9:100656000-100667600 Weak transcription Fetal Muscle Leg muscle
20 chr9:100656000-100669400 Weak transcription Brain Substantia Nigra brain
21 chr9:100656200-100661800 Weak transcription Fetal Stomach stomach
22 chr9:100656200-100662800 Weak transcription HSMM muscle
23 chr9:100656200-100665600 Weak transcription Dnd41 blood
24 chr9:100656200-100666800 Weak transcription Brain Germinal Matrix brain
25 chr9:100656200-100670400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr9:100656400-100668400 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr9:100656400-100669800 Weak transcription Brain Cingulate Gyrus brain
28 chr9:100656400-100669800 Weak transcription Fetal Brain Female brain
29 chr9:100656600-100659200 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr9:100656600-100660200 Weak transcription Thymus Thymus
31 chr9:100656600-100662200 Weak transcription Lung lung
32 chr9:100656600-100663000 Weak transcription Colon Smooth Muscle Colon
33 chr9:100656600-100667000 Weak transcription Brain Anterior Caudate brain
34 chr9:100656800-100659400 Weak transcription Liver Liver
35 chr9:100656800-100660200 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr9:100656800-100666800 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr9:100656800-100668400 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr9:100656800-100669400 Weak transcription Left Ventricle heart
39 chr9:100656800-100672400 Weak transcription Stomach Mucosa stomach
40 chr9:100657000-100660400 Weak transcription Fetal Intestine Small intestine
41 chr9:100657000-100662000 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr9:100657000-100662600 Weak transcription Primary hematopoietic stem cells blood
43 chr9:100657000-100666600 Weak transcription Placenta Placenta
44 chr9:100657000-100669400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr9:100657000-100669400 Weak transcription Right Ventricle heart
46 chr9:100657400-100660600 Strong transcription Primary T cells from cord blood blood
47 chr9:100657800-100659600 Weak transcription Monocytes-CD14+_RO01746 blood
48 chr9:100657800-100662200 Weak transcription Fetal Muscle Trunk muscle
49 chr9:100658000-100665000 Weak transcription Primary monocytes fromperipheralblood blood
50 chr9:100658200-100664800 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015