Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:56911097..56913730-chr15:56923254..56925300,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10851611	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12898673	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2170460	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2414481	1.00[AMR][1000 genomes]
rs4143730	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4448877	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs475512	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs4774880	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4774882	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4774883	1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs479060	1.00[AMR][1000 genomes]
rs508037	1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs541840	1.00[AMR][1000 genomes]
rs6493879	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6493881	1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs795035	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs795036	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs8025919	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8043381	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs989535	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3422474	chr15:56867190-57244330	Strong transcription ZNF genes & repeats Active TSS Enhancers Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
2	nsv1041239	chr15:56888945-56959028	Weak transcription Strong transcription Flanking Active TSS Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:56902800-56945400	Weak transcription	Right Ventricle	heart
2	chr15:56905600-56923600	Weak transcription	Left Ventricle	heart
3	chr15:56908800-56923400	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr15:56910600-56945400	Weak transcription	HSMMtube	muscle
5	chr15:56911600-56913400	Enhancers	Dnd41	blood
6	chr15:56912200-56912800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr15:56912200-56912800	Active TSS	Monocytes-CD14+_RO01746	blood
8	chr15:56912400-56913200	Weak transcription	Fetal Thymus	thymus
9	chr15:56912400-56913600	Weak transcription	Thymus	Thymus
10	chr15:56912400-56914800	Weak transcription	Primary T cells from cord blood	blood
11	chr15:56912600-56912800	Enhancers	Adipose Nuclei	Adipose

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