The 2.0 version of rSNPBase

Variant report

Variant rs989535
Chromosome Location chr15:56934542-56934543
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56902800-56945400 Weak transcription Right Ventricle heart
2 chr15:56910600-56945400 Weak transcription HSMMtube muscle
3 chr15:56912800-56957000 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr15:56913400-56955200 Weak transcription Aorta Aorta
5 chr15:56915200-56937400 Weak transcription Liver Liver
6 chr15:56916600-56990800 Weak transcription Pancreas Pancrea
7 chr15:56916800-56949800 Weak transcription Fetal Kidney kidney
8 chr15:56917200-56955200 Weak transcription Psoas Muscle Psoas
9 chr15:56917600-56944800 Weak transcription Fetal Brain Male brain
10 chr15:56917600-56957000 Weak transcription Brain Anterior Caudate brain
11 chr15:56917800-56938200 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr15:56917800-56945400 Weak transcription GM12878-XiMat blood
13 chr15:56917800-56955800 Weak transcription Brain Cingulate Gyrus brain
14 chr15:56917800-56956800 Weak transcription Colon Smooth Muscle Colon
15 chr15:56917800-56959800 Weak transcription Brain Angular Gyrus brain
16 chr15:56917800-56990600 Weak transcription Rectal Smooth Muscle rectum
17 chr15:56917800-56990600 Weak transcription NHLF lung
18 chr15:56918000-56945200 Weak transcription A549 lung
19 chr15:56918000-56945600 Weak transcription Stomach Smooth Muscle stomach
20 chr15:56918400-56945400 Weak transcription Fetal Intestine Small intestine
21 chr15:56918400-56957200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr15:56919600-56955200 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr15:56919800-57016600 Weak transcription Small Intestine intestine
24 chr15:56920000-56945400 Weak transcription Fetal Intestine Large intestine
25 chr15:56920000-56953000 Weak transcription Fetal Muscle Trunk muscle
26 chr15:56920400-56945400 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr15:56921600-56955200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr15:56921600-56955400 Weak transcription NH-A brain
29 chr15:56922000-56954800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr15:56922000-56958000 Weak transcription Lung lung
31 chr15:56922200-56945400 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr15:56922400-56938600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr15:56922400-56945400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr15:56922800-56945400 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr15:56923000-56940200 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr15:56923800-56938800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr15:56923800-56938800 Weak transcription Brain Substantia Nigra brain
38 chr15:56924000-56938000 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr15:56924000-56945400 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr15:56924000-56945400 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr15:56924000-56990600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr15:56924000-56990800 Weak transcription NHEK skin
43 chr15:56924200-56938600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr15:56924200-56938800 Weak transcription Primary B cells from peripheral blood blood
45 chr15:56924200-56939800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr15:56924200-56944800 Weak transcription Primary T cells fromperipheralblood blood
47 chr15:56924200-56945400 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr15:56924200-56945400 Weak transcription Brain Hippocampus Middle brain
49 chr15:56924200-56945400 Weak transcription Duodenum Mucosa Duodenum
50 chr15:56924200-56945400 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015