Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1006857	1.00[MEX][hapmap]
rs10500506	1.00[ASW][hapmap];0.83[YRI][hapmap]
rs10500507	1.00[MEX][hapmap]
rs11866929	1.00[CEU][hapmap];0.83[YRI][hapmap]
rs16968018	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16968051	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16968351	0.83[YRI][hapmap]
rs16968359	0.83[YRI][hapmap]
rs16968386	1.00[CEU][hapmap]
rs16968437	1.00[MEX][hapmap]
rs16968465	1.00[MEX][hapmap]
rs16968466	1.00[MEX][hapmap]
rs56244098	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56252319	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57941915	0.98[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs61143204	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6498965	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6498967	1.00[CEU][hapmap];0.83[YRI][hapmap]
rs7192855	0.90[ASW][hapmap];0.84[LWK][hapmap];0.83[YRI][hapmap]
rs7192859	1.00[CEU][hapmap];0.83[YRI][hapmap]
rs7198314	0.83[YRI][hapmap]
rs74023001	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs74026211	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8049948	0.89[ASW][hapmap];1.00[MEX][hapmap]
rs8050117	1.00[CEU][hapmap];0.83[YRI][hapmap]
rs8057316	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948640	chr16:64859061-65112790	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
2	nsv984501	chr16:64919797-64993897	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases
3	nsv974823	chr16:64943759-64945594	Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:64943800-64945000	Enhancers	Fetal Lung	lung
2	chr16:64943800-64945000	Enhancers	HSMMtube	muscle
3	chr16:64944000-64945000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr16:64944200-64945000	Enhancers	Fetal Brain Male	brain
5	chr16:64944400-64945000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr16:64944400-64945200	Enhancers	Osteobl	bone
7	chr16:64944600-64945000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr16:64944600-64945000	Flanking Active TSS	NH-A	brain
9	chr16:64944800-64945000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr16:64944800-64945000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr16:64944800-64945000	Enhancers	Muscle Satellite Cultured Cells	--
12	chr16:64944800-64945000	Flanking Active TSS	NHDF-Ad	bronchial
13	chr16:64944800-64948800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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