Variant report

Variant	rs6517477
Chromosome Location	chr21:40072376-40072377
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1003763	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1893202	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2009690	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2070527	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2226685	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2246005	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2836613	0.83[EUR][1000 genomes]
rs2836619	0.86[EUR][1000 genomes]
rs2836620	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2836638	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6517476	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs762384	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:40060000-40073200	Weak transcription	Aorta	Aorta
2	chr21:40071600-40074400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr21:40072000-40073800	Weak transcription	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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