Variant report

Variant	rs762384
Chromosome Location	chr21:40074396-40074397
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1003763	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1893202	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2009690	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2070527	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2226685	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2246005	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2836613	0.83[EUR][1000 genomes]
rs2836619	0.85[EUR][1000 genomes]
rs2836620	0.93[EUR][1000 genomes]
rs2836638	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6517476	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6517477	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:40071600-40074400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr21:40073800-40074800	Enhancers	Fetal Heart	heart
3	chr21:40074000-40074400	Bivalent Enhancer	Duodenum Smooth Muscle	Duodenum
4	chr21:40074000-40074600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr21:40074000-40074800	Bivalent Enhancer	Fetal Stomach	stomach
6	chr21:40074200-40074800	Active TSS	Aorta	Aorta
7	chr21:40074200-40074800	Enhancers	Colon Smooth Muscle	Colon

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links