Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:50118503..50121981-chr10:50130452..50133812,3	K562	blood:

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10776652	0.90[ASN][1000 genomes]
rs11101558	0.98[ASN][1000 genomes]
rs11595341	0.98[ASN][1000 genomes]
rs1913517	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2377652	0.88[ASN][1000 genomes]
rs2377653	0.93[ASN][1000 genomes]
rs2377654	0.93[ASN][1000 genomes]
rs2620878	0.80[ASN][1000 genomes]
rs2663038	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2663041	0.90[ASN][1000 genomes]
rs2663054	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2671692	0.85[ASN][1000 genomes]
rs2671694	0.98[ASN][1000 genomes]
rs2671710	0.82[ASN][1000 genomes]
rs2671711	0.82[ASN][1000 genomes]
rs2671712	0.82[ASN][1000 genomes]
rs2940730	0.83[ASN][1000 genomes]
rs2943245	0.90[ASN][1000 genomes]
rs2943255	0.82[ASN][1000 genomes]
rs3860191	0.99[ASN][1000 genomes]
rs4838657	0.98[ASN][1000 genomes]
rs7068839	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7069142	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7086101	0.97[ASN][1000 genomes]
rs7086333	0.97[ASN][1000 genomes]
rs7088194	0.83[ASN][1000 genomes]
rs7094610	0.84[ASN][1000 genomes]
rs7900483	0.87[ASN][1000 genomes]
rs7913620	0.98[ASN][1000 genomes]
rs7923621	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895371	chr10:49492075-50232180	Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
2	nsv831865	chr10:49994254-50164239	Weak transcription Enhancers Bivalent Enhancer Genic enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:50072800-50126200	Strong transcription	Primary B cells from peripheral blood	blood
2	chr10:50074600-50129600	Strong transcription	Primary B cells from cord blood	blood
3	chr10:50075400-50126000	Strong transcription	Primary neutrophils fromperipheralblood	blood
4	chr10:50101600-50122800	Weak transcription	Rectal Mucosa Donor 29	rectum
5	chr10:50108400-50126000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
6	chr10:50109000-50126000	Strong transcription	Monocytes-CD14+_RO01746	blood
7	chr10:50109400-50127800	Strong transcription	Primary monocytes fromperipheralblood	blood
8	chr10:50114200-50122800	Weak transcription	Lung	lung
9	chr10:50116200-50121400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr10:50118200-50121000	Strong transcription	Primary hematopoietic stem cells	blood
11	chr10:50118200-50121000	Strong transcription	Spleen	Spleen
12	chr10:50118200-50124800	Strong transcription	GM12878-XiMat	blood
13	chr10:50118800-50123600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr10:50120200-50122400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr10:50120400-50120800	Weak transcription	Fetal Stomach	stomach
16	chr10:50120400-50121000	Strong transcription	Primary T cells from cord blood	blood
17	chr10:50120400-50124800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood

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