Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10520249	1.00[CEU][hapmap]
rs10520251	0.84[CEU][hapmap]
rs12641678	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs17254079	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs17254611	0.85[CEU][hapmap]
rs17254681	0.84[CEU][hapmap]
rs17319267	1.00[ASN][1000 genomes]
rs17319595	0.92[CEU][hapmap]
rs2332610	1.00[ASN][1000 genomes]
rs2610186	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2610188	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2610191	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2653831	0.84[CEU][hapmap];0.83[EUR][1000 genomes]
rs2653844	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4547777	0.84[CEU][hapmap]
rs55936404	1.00[ASN][1000 genomes]
rs56110146	0.93[EUR][1000 genomes]
rs6852770	0.92[CEU][hapmap];0.93[EUR][1000 genomes]
rs72708729	1.00[ASN][1000 genomes]
rs7678191	1.00[CEU][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948856	chr4:173388217-173967546	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv949126	chr4:173466221-174051451	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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