Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs1015726	0.95[YRI][hapmap]
rs10485232	0.91[YRI][hapmap]
rs10872404	0.81[ASN][1000 genomes]
rs11754045	0.95[YRI][hapmap]
rs11759873	0.90[YRI][hapmap]
rs12527527	0.96[YRI][hapmap]
rs1336524	0.80[YRI][hapmap]
rs17062339	0.83[MKK][hapmap];0.91[YRI][hapmap]
rs17242333	0.83[MKK][hapmap];0.96[YRI][hapmap]
rs17301622	0.87[YRI][hapmap]
rs17301712	0.83[MKK][hapmap];0.91[YRI][hapmap]
rs17301872	0.81[MKK][hapmap]
rs17301914	0.91[YRI][hapmap]
rs1814195	0.80[YRI][hapmap]
rs211629	0.94[CEU][hapmap]
rs212826	0.94[CEU][hapmap]
rs2184783	0.83[CEU][hapmap]
rs2184784	0.91[CHB][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs2785238	1.00[YRI][hapmap]
rs296417	0.87[YRI][hapmap]
rs373884	0.83[LWK][hapmap];0.85[MKK][hapmap];0.96[YRI][hapmap]
rs6569877	0.90[CHB][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs6900552	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6924629	0.91[CHB][hapmap];0.95[CHD][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs6930942	0.94[ASN][1000 genomes]
rs7454561	0.81[MKK][hapmap];0.91[YRI][hapmap]
rs7750244	0.94[CEU][hapmap]
rs9375959	0.88[CEU][hapmap]
rs9389074	0.94[CEU][hapmap]
rs9399059	0.88[CHD][hapmap];0.81[ASN][1000 genomes]
rs9483575	0.94[ASN][1000 genomes]
rs950374	0.88[CHD][hapmap];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886680	chr6:133613759-133663021	Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133613000-133655000	Weak transcription	Hela-S3	cervix
2	chr6:133643200-133658200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr6:133648000-133654400	Weak transcription	Psoas Muscle	Psoas
4	chr6:133648600-133654200	Weak transcription	Skeletal Muscle Female	skeletal muscle

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