Variant report

Variant	rs6569894
Chromosome Location	chr6:133989016-133989017
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs12203961	0.80[ASN][1000 genomes]
rs12210532	0.81[CHB][hapmap]
rs13196860	0.80[ASN][1000 genomes]
rs1468052	0.81[ASN][1000 genomes]
rs1468054	0.82[ASN][1000 genomes]
rs1476382	0.81[ASN][1000 genomes]
rs17398008	0.81[CHB][hapmap]
rs17476396	0.81[CHB][hapmap]
rs2015084	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2207405	0.81[ASN][1000 genomes]
rs2327380	0.89[ASN][1000 genomes]
rs34537042	0.81[ASN][1000 genomes]
rs4470864	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6569889	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6569890	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6569892	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6900835	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6900893	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6914525	0.99[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs6925029	0.82[ASN][1000 genomes]
rs6933141	0.84[EUR][1000 genomes]
rs71576327	0.81[ASN][1000 genomes]
rs766996	0.81[ASN][1000 genomes]
rs7738973	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7750428	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7767765	0.82[ASN][1000 genomes]
rs9321408	0.84[AMR][1000 genomes]
rs9321411	0.81[ASN][1000 genomes]
rs9483598	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9483599	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9483600	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9493685	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9493690	0.83[CHB][hapmap];0.83[ASN][1000 genomes]
rs9493692	0.83[ASN][1000 genomes]
rs9493695	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1032687	chr6:133987372-134059728	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1024201	chr6:133987372-134062162	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133988800-133995600	Weak transcription	Fetal Lung	lung

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