Variant report

Variant	rs6583771
Chromosome Location	chr10:93145578-93145579
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11186548	1.00[EUR][1000 genomes]
rs12244852	0.89[YRI][hapmap];0.80[EUR][1000 genomes]
rs12248059	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12257543	0.80[EUR][1000 genomes]
rs12266111	0.80[EUR][1000 genomes]
rs17106706	0.89[YRI][hapmap];0.80[EUR][1000 genomes]
rs7071064	0.90[YRI][hapmap];0.80[EUR][1000 genomes]
rs7081299	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7081707	0.89[YRI][hapmap];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7087338	0.90[YRI][hapmap];0.80[EUR][1000 genomes]
rs7894994	1.00[EUR][1000 genomes]
rs7903943	1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7920590	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93140000-93145600	Enhancers	Fetal Brain Male	brain
2	chr10:93142400-93149400	Weak transcription	Fetal Lung	lung
3	chr10:93142400-93149800	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr10:93142600-93149600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr10:93143200-93147200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr10:93144600-93145600	Enhancers	Fetal Brain Female	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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