Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:215115985..215117866-chr1:215122613..215125049,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000223869	Chromatin interaction

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11120449	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1377185	0.90[ASN][1000 genomes]
rs475341	0.89[CHB][hapmap];0.93[JPT][hapmap];0.86[ASN][1000 genomes]
rs486980	0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs487527	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs497870	0.89[CHB][hapmap];0.92[JPT][hapmap]
rs501475	0.86[ASN][1000 genomes]
rs506765	0.86[ASN][1000 genomes]
rs520982	0.86[ASN][1000 genomes]
rs527388	0.86[ASN][1000 genomes]
rs530931	0.89[CHB][hapmap];0.92[JPT][hapmap]
rs534411	0.86[ASN][1000 genomes]
rs542158	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs549523	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs556648	0.96[ASN][1000 genomes]
rs559944	0.86[ASN][1000 genomes]
rs561766	0.89[CHB][hapmap];0.93[JPT][hapmap];0.86[ASN][1000 genomes]
rs562935	0.86[ASN][1000 genomes]
rs566170	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6684902	1.00[CEU][hapmap];0.89[CHB][hapmap];0.92[JPT][hapmap];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6690944	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs896652	0.81[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215113400-215130000	Weak transcription	NHDF-Ad	bronchial
2	chr1:215121600-215130000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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