The 2.0 version of rSNPBase

Variant report

Variant rs66858682
Chromosome Location chr3:119375220-119375221
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:119349800-119378800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr3:119352000-119378600 Weak transcription Thymus Thymus
3 chr3:119354000-119387600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr3:119356200-119389000 Weak transcription Brain Cingulate Gyrus brain
5 chr3:119356800-119390000 Weak transcription Brain Inferior Temporal Lobe brain
6 chr3:119356800-119391800 Weak transcription Brain Substantia Nigra brain
7 chr3:119356800-119391800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr3:119357200-119383800 Weak transcription Primary B cells from cord blood blood
9 chr3:119357800-119386400 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr3:119358000-119390600 Weak transcription Brain Anterior Caudate brain
11 chr3:119358000-119391800 Weak transcription Colonic Mucosa Colon
12 chr3:119358400-119376600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr3:119358600-119376800 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr3:119361200-119378800 Weak transcription Fetal Thymus thymus
15 chr3:119361200-119394400 Weak transcription Brain Angular Gyrus brain
16 chr3:119361400-119378800 Weak transcription Brain Hippocampus Middle brain
17 chr3:119362400-119387400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr3:119362600-119378400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr3:119362600-119383800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr3:119363200-119389400 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr3:119363200-119389800 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr3:119365200-119387400 Weak transcription Liver Liver
23 chr3:119367200-119375600 Weak transcription GM12878-XiMat blood
24 chr3:119367200-119378800 Weak transcription Gastric stomach
25 chr3:119367200-119381800 Weak transcription Fetal Lung lung
26 chr3:119367400-119377800 Weak transcription Fetal Intestine Small intestine
27 chr3:119367400-119378000 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr3:119367400-119378600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr3:119367400-119378800 Weak transcription Pancreas Pancrea
30 chr3:119367600-119378200 Weak transcription Fetal Intestine Large intestine
31 chr3:119367600-119389200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr3:119367600-119391200 Weak transcription Fetal Brain Female brain
33 chr3:119367800-119378000 Weak transcription Primary T cells fromperipheralblood blood
34 chr3:119367800-119385400 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr3:119367800-119386600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr3:119367800-119388800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr3:119368000-119386000 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr3:119368200-119388200 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr3:119368800-119376400 Weak transcription Primary T cells from cord blood blood
40 chr3:119371600-119379200 Weak transcription Muscle Satellite Cultured Cells --
41 chr3:119371800-119378200 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr3:119371800-119378800 Weak transcription Spleen Spleen
43 chr3:119372000-119378200 Weak transcription Lung lung
44 chr3:119372200-119376000 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr3:119372400-119377800 Weak transcription Fetal Muscle Trunk muscle
46 chr3:119372600-119375800 Genic enhancers Skeletal Muscle Female skeletal muscle
47 chr3:119373200-119376400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr3:119373200-119376600 Weak transcription Primary B cells from peripheral blood blood
49 chr3:119373200-119376800 Weak transcription Primary monocytes fromperipheralblood blood
50 chr3:119373200-119378200 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015