The 2.0 version of rSNPBase

Variant report

Variant rs6687849
Chromosome Location chr1:175904809-175904810
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175863200-175906400 Weak transcription Muscle Satellite Cultured Cells --
2 chr1:175874400-175945600 Weak transcription A549 lung
3 chr1:175880000-175937800 Weak transcription HSMMtube muscle
4 chr1:175881000-175905200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr1:175881000-175924200 Weak transcription Brain Angular Gyrus brain
6 chr1:175882600-175910200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:175883200-175908200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr1:175886400-175929400 Weak transcription Brain Inferior Temporal Lobe brain
9 chr1:175887800-175929800 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr1:175889200-175937800 Weak transcription Osteobl bone
11 chr1:175891400-175908800 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:175892000-175908800 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr1:175892400-175940600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:175893200-175943000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:175895200-175908800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr1:175895800-175908800 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr1:175897000-175953000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr1:175897200-175908800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:175897600-175905200 Weak transcription H1 Cell Line embryonic stem cell
20 chr1:175897600-175905200 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr1:175897600-175905800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr1:175897600-175908400 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr1:175897600-175908800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:175897600-175909200 Weak transcription Brain Germinal Matrix brain
25 chr1:175897600-175911000 Weak transcription Thymus Thymus
26 chr1:175897600-175953200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr1:175897800-175952400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:175898400-175909000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:175898600-175953200 Weak transcription Pancreas Pancrea
30 chr1:175898800-175905000 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr1:175898800-175909000 Weak transcription Left Ventricle heart
32 chr1:175899000-175908800 Weak transcription Fetal Intestine Large intestine
33 chr1:175899200-175953200 Weak transcription Esophagus oesophagus
34 chr1:175899600-175907200 Weak transcription Fetal Intestine Small intestine
35 chr1:175899800-175906000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr1:175900800-175907400 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr1:175900800-175908400 Weak transcription Dnd41 blood
38 chr1:175901400-175908600 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr1:175901600-175940600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr1:175901800-175906000 Weak transcription Fetal Brain Female brain
41 chr1:175901800-175925800 Weak transcription HUVEC blood vessel
42 chr1:175902000-175905800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr1:175902400-175914800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr1:175902400-175917800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr1:175902600-175909000 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr1:175902800-175906200 Weak transcription Fetal Stomach stomach
47 chr1:175902800-175906400 Weak transcription Stomach Smooth Muscle stomach
48 chr1:175902800-175931800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr1:175903200-175906000 Weak transcription Lung lung
50 chr1:175903200-175907800 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015