The 2.0 version of rSNPBase

Variant report

Variant rs10798430
Chromosome Location chr1:175951347-175951348
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175897000-175953000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr1:175897600-175953200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:175897800-175952400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr1:175898600-175953200 Weak transcription Pancreas Pancrea
5 chr1:175899200-175953200 Weak transcription Esophagus oesophagus
6 chr1:175903400-175951400 Weak transcription K562 blood
7 chr1:175904200-175956200 Weak transcription Psoas Muscle Psoas
8 chr1:175904600-175953000 Weak transcription Right Ventricle heart
9 chr1:175906400-175952400 Weak transcription Spleen Spleen
10 chr1:175906400-175962600 Weak transcription NH-A brain
11 chr1:175906800-175952000 Weak transcription Stomach Smooth Muscle stomach
12 chr1:175908000-175959400 Weak transcription NHEK skin
13 chr1:175916400-175952200 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr1:175917600-175953000 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr1:175922000-175952000 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr1:175924600-175953200 Weak transcription Gastric stomach
17 chr1:175924600-175953200 Weak transcription HepG2 liver
18 chr1:175925000-175951800 Weak transcription Brain Anterior Caudate brain
19 chr1:175930400-175951800 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr1:175930400-175952200 Weak transcription H9 Cell Line embryonic stem cell
21 chr1:175930600-175951400 Weak transcription Fetal Kidney kidney
22 chr1:175937400-175951400 Weak transcription ES-WA7 Cell Line embryonic stem cell
23 chr1:175938000-175951800 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr1:175938200-175951800 Weak transcription H1 Cell Line embryonic stem cell
25 chr1:175938800-175952200 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr1:175939000-175951400 Weak transcription Placenta Amnion Placenta Amnion
27 chr1:175939400-175952200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr1:175940400-175953800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr1:175941000-175952600 Weak transcription Colonic Mucosa Colon
30 chr1:175941000-175953200 Weak transcription Brain Cingulate Gyrus brain
31 chr1:175941200-175951400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr1:175941200-175951800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr1:175941200-175952400 Weak transcription Left Ventricle heart
34 chr1:175941200-175952400 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr1:175941200-175952400 Weak transcription Thymus Thymus
36 chr1:175941200-175952800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr1:175941200-175953200 Weak transcription Lung lung
38 chr1:175941400-175951600 Weak transcription Hela-S3 cervix
39 chr1:175941400-175951800 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr1:175941600-175952200 Weak transcription Fetal Thymus thymus
41 chr1:175942200-175951800 Weak transcription Placenta Placenta
42 chr1:175943400-175951600 Weak transcription Dnd41 blood
43 chr1:175945000-175952400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr1:175945800-175953400 Weak transcription Aorta Aorta
45 chr1:175946000-175996000 Weak transcription HMEC breast
46 chr1:175947600-175952800 Strong transcription Monocytes-CD14+_RO01746 blood
47 chr1:175948000-175951600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr1:175948200-175952400 Weak transcription Brain Hippocampus Middle brain
49 chr1:175948200-175952800 Weak transcription Rectal Smooth Muscle rectum
50 chr1:175948200-175957400 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015