The 2.0 version of rSNPBase

Variant report

Variant rs61821055
Chromosome Location chr1:176148383-176148384
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:176065600-176154800 Weak transcription Aorta Aorta
2 chr1:176070400-176151400 Weak transcription Pancreas Pancrea
3 chr1:176100800-176153200 Weak transcription Colonic Mucosa Colon
4 chr1:176110600-176164000 Weak transcription NHLF lung
5 chr1:176123800-176150000 Weak transcription Osteobl bone
6 chr1:176126400-176168800 Weak transcription Small Intestine intestine
7 chr1:176127000-176174000 Weak transcription Colon Smooth Muscle Colon
8 chr1:176127200-176153400 Weak transcription Brain Inferior Temporal Lobe brain
9 chr1:176127400-176153400 Weak transcription Stomach Smooth Muscle stomach
10 chr1:176127400-176155400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr1:176128000-176157800 Weak transcription Spleen Spleen
12 chr1:176128000-176175200 Weak transcription Esophagus oesophagus
13 chr1:176128400-176154600 Weak transcription Rectal Smooth Muscle rectum
14 chr1:176128600-176155600 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr1:176128800-176152800 Weak transcription Brain Cingulate Gyrus brain
16 chr1:176128800-176152800 Weak transcription Placenta Amnion Placenta Amnion
17 chr1:176128800-176154200 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr1:176132200-176154200 Weak transcription NH-A brain
19 chr1:176134400-176152800 Weak transcription Brain Angular Gyrus brain
20 chr1:176137400-176173000 Weak transcription Right Ventricle heart
21 chr1:176138200-176155800 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr1:176138800-176155400 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr1:176139000-176153800 Strong transcription Dnd41 blood
24 chr1:176139800-176149200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:176139800-176152600 Weak transcription Brain Anterior Caudate brain
26 chr1:176140000-176155800 Weak transcription Fetal Brain Female brain
27 chr1:176140000-176157800 Weak transcription H1 Cell Line embryonic stem cell
28 chr1:176140000-176168200 Weak transcription Psoas Muscle Psoas
29 chr1:176140200-176150200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr1:176140200-176152200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr1:176140800-176148400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr1:176140800-176149200 Weak transcription Brain Hippocampus Middle brain
33 chr1:176140800-176153600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr1:176140800-176155800 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr1:176142200-176149200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr1:176142200-176149200 Weak transcription Hela-S3 cervix
37 chr1:176142200-176153400 Weak transcription Fetal Heart heart
38 chr1:176142200-176154400 Weak transcription Fetal Kidney kidney
39 chr1:176142400-176149600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr1:176142800-176149800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr1:176142800-176157800 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr1:176142800-176162200 Weak transcription HepG2 liver
43 chr1:176143000-176150600 Weak transcription Fetal Intestine Small intestine
44 chr1:176143000-176150600 Weak transcription Thymus Thymus
45 chr1:176143000-176151200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr1:176143000-176153000 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr1:176143000-176165800 Weak transcription Lung lung
48 chr1:176143600-176152400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:176143800-176153200 Weak transcription HSMMtube muscle
50 chr1:176144000-176149800 Weak transcription HSMM muscle

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Last update: Aug 31, 2015