The 2.0 version of rSNPBase

Variant report

Variant rs4652146
Chromosome Location chr1:176025176-176025177
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175976800-176046000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr1:175978200-176050600 Weak transcription Aorta Aorta
3 chr1:175978400-176069000 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr1:175979600-176045400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr1:175980200-176028000 Weak transcription K562 blood
6 chr1:175989800-176036400 Weak transcription Pancreas Pancrea
7 chr1:175994200-176065200 Weak transcription Psoas Muscle Psoas
8 chr1:176004000-176026400 Weak transcription Small Intestine intestine
9 chr1:176004000-176036400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr1:176004200-176039800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr1:176006000-176045200 Weak transcription GM12878-XiMat blood
12 chr1:176006200-176049000 Weak transcription HSMM muscle
13 chr1:176007800-176066400 Weak transcription Fetal Brain Male brain
14 chr1:176010200-176048000 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr1:176010400-176066000 Weak transcription Muscle Satellite Cultured Cells --
16 chr1:176012200-176028200 Weak transcription Fetal Intestine Small intestine
17 chr1:176012200-176044800 Weak transcription Fetal Stomach stomach
18 chr1:176012200-176045200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr1:176012200-176045200 Weak transcription Esophagus oesophagus
20 chr1:176012200-176045200 Weak transcription Fetal Lung lung
21 chr1:176012400-176029200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr1:176012400-176036400 Weak transcription Fetal Muscle Leg muscle
23 chr1:176012400-176036400 Weak transcription Gastric stomach
24 chr1:176012400-176036400 Weak transcription Left Ventricle heart
25 chr1:176012400-176036400 Weak transcription Spleen Spleen
26 chr1:176012400-176045400 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr1:176012400-176045800 Weak transcription Brain Hippocampus Middle brain
28 chr1:176012400-176048200 Weak transcription Ovary ovary
29 chr1:176012400-176048200 Weak transcription Thymus Thymus
30 chr1:176012400-176062800 Weak transcription Lung lung
31 chr1:176012400-176065800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr1:176012800-176027800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr1:176012800-176030400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr1:176012800-176036800 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr1:176012800-176038000 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr1:176012800-176040000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr1:176012800-176042600 Weak transcription Liver Liver
38 chr1:176012800-176047000 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr1:176013000-176028000 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr1:176013000-176040000 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr1:176013000-176045000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr1:176013400-176040000 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr1:176013600-176037600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr1:176013600-176040000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr1:176014000-176029600 Weak transcription Primary hematopoietic stem cells blood
46 chr1:176014200-176026200 Weak transcription Fetal Intestine Large intestine
47 chr1:176014400-176039800 Weak transcription Primary B cells from peripheral blood blood
48 chr1:176014400-176045200 Weak transcription Primary T cells fromperipheralblood blood
49 chr1:176015400-176026200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr1:176015400-176027800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015