Variant report

Variant	rs6699049
Chromosome Location	chr1:211169597-211169598
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10779546	0.82[AMR][1000 genomes]
rs10779547	0.80[AMR][1000 genomes]
rs10779548	0.86[EUR][1000 genomes]
rs11119633	0.85[EUR][1000 genomes]
rs1354112	0.85[EUR][1000 genomes]
rs1393029	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1501547	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1501556	0.87[EUR][1000 genomes]
rs1542887	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1846946	0.85[EUR][1000 genomes]
rs2088878	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2358091	0.83[EUR][1000 genomes]
rs3951251	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4642960	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4951491	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4951492	0.81[AMR][1000 genomes]
rs4951702	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4951708	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4951710	0.81[AMR][1000 genomes]
rs6692020	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7547937	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs985382	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211152800-211183400	Weak transcription	HSMMtube	muscle
2	chr1:211163800-211179400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr1:211168000-211180600	Weak transcription	HSMM	muscle
4	chr1:211168000-211181600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr1:211169400-211170200	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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