Variant report

Variant	rs1501547
Chromosome Location	chr1:211168577-211168578
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10779546	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10779547	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10779548	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11119633	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11119639	0.86[AFR][1000 genomes]
rs1354112	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1393029	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1501556	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1501561	0.90[AFR][1000 genomes]
rs1542887	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17188755	0.92[ASN][1000 genomes]
rs1777242	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1846946	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1875437	0.86[EUR][1000 genomes]
rs2062673	0.97[AFR][1000 genomes]
rs2088878	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2202095	0.83[AFR][1000 genomes]
rs2358091	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3951251	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4642960	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4951491	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4951492	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4951701	0.97[AFR][1000 genomes]
rs4951702	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4951706	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4951708	0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4951710	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6692020	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6699049	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6702809	0.92[AFR][1000 genomes]
rs7547937	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs985382	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211152600-211169400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr1:211152800-211183400	Weak transcription	HSMMtube	muscle
3	chr1:211163800-211179400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr1:211168000-211180600	Weak transcription	HSMM	muscle
5	chr1:211168000-211181600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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