Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10779546	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10779547	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10779548	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1354112	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1393029	0.86[EUR][1000 genomes]
rs1501547	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1501556	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1542887	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1777242	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1846946	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1875437	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2088878	0.84[EUR][1000 genomes]
rs2358091	0.90[EUR][1000 genomes]
rs4642960	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4951491	0.85[EUR][1000 genomes]
rs4951492	0.82[EUR][1000 genomes]
rs4951702	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4951708	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4951710	0.84[EUR][1000 genomes]
rs6692020	0.86[EUR][1000 genomes]
rs6699049	0.85[EUR][1000 genomes]
rs7547937	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs985382	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873154	chr1:211057697-211117197	Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211093400-211110800	Weak transcription	HSMM	muscle

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