Variant report

Variant	rs6704132
Chromosome Location	chr1:209344008-209344009
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11586407	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11586451	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12722814	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12755287	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1933610	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1933612	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1933619	0.82[ASN][1000 genomes]
rs2250701	0.85[JPT][hapmap]
rs2489651	0.82[ASN][1000 genomes]
rs2788161	0.82[ASN][1000 genomes]
rs2788162	0.82[ASN][1000 genomes]
rs2788168	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2788170	0.82[ASN][1000 genomes]
rs2970555	0.82[ASN][1000 genomes]
rs2970556	0.82[ASN][1000 genomes]
rs2996688	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34523921	0.80[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs4402132	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4518909	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6658956	0.95[CEU][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6672407	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs66763810	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6678963	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6692414	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs71636106	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:209336000-209350400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr1:209342000-209345800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr1:209342200-209345600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr1:209342400-209345400	Weak transcription	NHEK	skin
5	chr1:209342600-209345400	Weak transcription	HMEC	breast
6	chr1:209343000-209344600	Weak transcription	Fetal Lung	lung
7	chr1:209343000-209345400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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