Variant report

Variant	rs67214975
Chromosome Location	chr10:18727251-18727252
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11014084	0.80[ASN][1000 genomes]
rs11014208	0.91[ASN][1000 genomes]
rs11014210	0.91[ASN][1000 genomes]
rs11014211	0.87[ASN][1000 genomes]
rs17690664	0.82[ASN][1000 genomes]
rs3829133	0.80[ASN][1000 genomes]
rs6482438	0.91[ASN][1000 genomes]
rs7096168	0.81[ASN][1000 genomes]
rs72786093	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv550042	chr10:18683267-18994583	ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18703600-18732000	Weak transcription	Pancreas	Pancrea
2	chr10:18719000-18730000	Weak transcription	Aorta	Aorta
3	chr10:18724800-18738600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr10:18726000-18730000	Enhancers	Fetal Heart	heart
5	chr10:18727200-18727600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr10:18727200-18727600	Enhancers	Left Ventricle	heart
7	chr10:18727200-18728200	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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