Variant report

Variant	rs6726291
Chromosome Location	chr2:72236979-72236980
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10175844	0.85[ASN][1000 genomes]
rs10208040	0.96[ASN][1000 genomes]
rs1105118	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1105119	0.80[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11126353	0.95[ASN][1000 genomes]
rs1517396	0.83[ASN][1000 genomes]
rs1543164	0.98[ASN][1000 genomes]
rs1543165	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2176407	0.94[ASN][1000 genomes]
rs2420045	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3860462	0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4405788	0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4852277	0.81[EUR][1000 genomes]
rs4852831	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4852832	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4852833	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4852836	0.87[ASN][1000 genomes]
rs4852838	0.86[ASN][1000 genomes]
rs7572229	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7594591	0.81[ASN][1000 genomes]
rs7598575	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs883311	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs883312	0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs908612	0.95[ASN][1000 genomes]
rs955788	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs955789	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:72232600-72240600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr2:72233800-72237600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr2:72235400-72237400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr2:72236000-72237400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr2:72236200-72237600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr2:72236200-72237600	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr2:72236400-72237600	Weak transcription	Hela-S3	cervix
8	chr2:72236800-72237200	Enhancers	Adipose Nuclei	Adipose

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