The 2.0 version of rSNPBase

Variant report

Variant rs675486
Chromosome Location chr11:100729227-100729228
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:100703000-100731800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr11:100720200-100745000 Weak transcription Fetal Muscle Leg muscle
3 chr11:100720600-100733400 Weak transcription Stomach Smooth Muscle stomach
4 chr11:100721000-100730800 Weak transcription Fetal Intestine Small intestine
5 chr11:100721600-100733400 Weak transcription Fetal Muscle Trunk muscle
6 chr11:100722200-100734000 Weak transcription Fetal Stomach stomach
7 chr11:100722600-100733800 Weak transcription NHDF-Ad bronchial
8 chr11:100722800-100746400 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr11:100722800-100747200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr11:100723400-100731200 Weak transcription Placenta Placenta
11 chr11:100725800-100732200 Enhancers HUES48 Cell Line embryonic stem cell
12 chr11:100726400-100729400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr11:100726400-100730800 Weak transcription Liver Liver
14 chr11:100726400-100732600 Enhancers HUES64 Cell Line embryonic stem cell
15 chr11:100726400-100738400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr11:100727000-100734000 Weak transcription HSMM muscle
17 chr11:100727200-100734000 Weak transcription Osteobl bone
18 chr11:100727400-100731000 Weak transcription H1 Cell Line embryonic stem cell
19 chr11:100727400-100731200 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr11:100728400-100729600 Enhancers Placenta Amnion Placenta Amnion
21 chr11:100728400-100731200 Weak transcription H9 Cell Line embryonic stem cell
22 chr11:100728600-100731400 Weak transcription A549 lung
23 chr11:100728600-100732000 Weak transcription Small Intestine intestine
24 chr11:100728600-100734000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr11:100728600-100734000 Weak transcription NH-A brain
26 chr11:100728800-100729800 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr11:100728800-100730000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr11:100728800-100731200 Weak transcription Stomach Mucosa stomach
29 chr11:100728800-100734000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr11:100728800-100740200 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr11:100728800-100741000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr11:100729000-100730000 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr11:100729000-100730800 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr11:100729000-100730800 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr11:100729000-100731000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr11:100729000-100733400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr11:100729000-100733400 Weak transcription HSMMtube muscle
38 chr11:100729200-100730000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr11:100729200-100730200 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr11:100729200-100731200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr11:100729200-100733800 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015