The 2.0 version of rSNPBase

Variant report

Variant rs6770267
Chromosome Location chr3:178949453-178949454
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:178899200-178951800 Weak transcription K562 blood
2 chr3:178906400-178962400 Weak transcription HepG2 liver
3 chr3:178911200-178953400 Weak transcription Gastric stomach
4 chr3:178912400-178978600 Weak transcription Right Ventricle heart
5 chr3:178913800-178954000 Weak transcription Fetal Heart heart
6 chr3:178913800-178969000 Weak transcription Small Intestine intestine
7 chr3:178914800-178972800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr3:178915800-178965200 Weak transcription Hela-S3 cervix
9 chr3:178917600-178953800 Weak transcription Colonic Mucosa Colon
10 chr3:178920200-178952800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr3:178920200-178968400 Weak transcription Spleen Spleen
12 chr3:178925800-178951600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr3:178925800-178968200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr3:178925800-178968600 Weak transcription Pancreas Pancrea
15 chr3:178928600-178962400 Weak transcription Brain Substantia Nigra brain
16 chr3:178928800-178953200 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr3:178929200-178954000 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr3:178929800-178962800 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr3:178930600-178954200 Weak transcription Fetal Intestine Small intestine
20 chr3:178931800-178951400 Weak transcription Colon Smooth Muscle Colon
21 chr3:178932200-178974000 Weak transcription Lung lung
22 chr3:178936000-178952400 Strong transcription Primary monocytes fromperipheralblood blood
23 chr3:178938200-178952400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr3:178938800-178950400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr3:178938800-178954000 Strong transcription Primary T helper cells fromperipheralblood blood
26 chr3:178939200-178949800 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr3:178941800-178972600 Weak transcription Brain Hippocampus Middle brain
28 chr3:178942800-178950200 Strong transcription Primary T helper cells PMA-I stimulated --
29 chr3:178942800-178965400 Weak transcription Stomach Smooth Muscle stomach
30 chr3:178945600-178951400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr3:178945600-178953000 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr3:178945800-178978400 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr3:178946800-178950000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr3:178946800-178950200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr3:178946800-178950200 Strong transcription Primary hematopoietic stem cells blood
36 chr3:178946800-178952200 Strong transcription Primary T cells from cord blood blood
37 chr3:178946800-178953400 Strong transcription Primary T cells fromperipheralblood blood
38 chr3:178946800-178953800 Strong transcription Primary T regulatory cells fromperipheralblood blood
39 chr3:178947000-178949800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr3:178947000-178949800 Strong transcription Fetal Intestine Large intestine
41 chr3:178947000-178950400 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr3:178947000-178952200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr3:178947000-178952800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr3:178947000-178954200 Strong transcription Fetal Thymus thymus
45 chr3:178947200-178952400 Strong transcription Primary B cells from peripheral blood blood
46 chr3:178947400-178949800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr3:178947400-178952800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr3:178947800-178949800 Strong transcription Brain Inferior Temporal Lobe brain
49 chr3:178947800-178953600 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr3:178947800-178953800 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015