The 2.0 version of rSNPBase

Variant report

Variant rs9850621
Chromosome Location chr3:178965233-178965234
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:178912400-178978600 Weak transcription Right Ventricle heart
2 chr3:178913800-178969000 Weak transcription Small Intestine intestine
3 chr3:178914800-178972800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr3:178920200-178968400 Weak transcription Spleen Spleen
5 chr3:178925800-178968200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr3:178925800-178968600 Weak transcription Pancreas Pancrea
7 chr3:178932200-178974000 Weak transcription Lung lung
8 chr3:178941800-178972600 Weak transcription Brain Hippocampus Middle brain
9 chr3:178942800-178965400 Weak transcription Stomach Smooth Muscle stomach
10 chr3:178945800-178978400 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr3:178948200-178967400 Weak transcription NHDF-Ad bronchial
12 chr3:178948400-178967600 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr3:178948800-178966600 Weak transcription Psoas Muscle Psoas
14 chr3:178948800-178978600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr3:178949000-178966200 Weak transcription Aorta Aorta
16 chr3:178949000-178968200 Weak transcription Fetal Stomach stomach
17 chr3:178949000-178970800 Weak transcription Rectal Smooth Muscle rectum
18 chr3:178949000-178978200 Weak transcription NHLF lung
19 chr3:178949000-178978600 Weak transcription Brain Cingulate Gyrus brain
20 chr3:178949000-178978600 Weak transcription Ovary ovary
21 chr3:178949000-178978800 Weak transcription Placenta Amnion Placenta Amnion
22 chr3:178949200-178967400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr3:178949200-178967600 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr3:178949200-178968600 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr3:178949200-178968600 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr3:178949200-178978400 Weak transcription Brain Anterior Caudate brain
27 chr3:178949200-178978600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr3:178949200-178978600 Weak transcription Osteobl bone
29 chr3:178949800-178969000 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr3:178952000-178968200 Weak transcription Fetal Brain Female brain
31 chr3:178952000-178978400 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr3:178952200-178967400 Weak transcription Liver Liver
33 chr3:178952200-178968400 Weak transcription Fetal Lung lung
34 chr3:178952200-178970400 Weak transcription Duodenum Mucosa Duodenum
35 chr3:178952200-178973000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr3:178952400-178967400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr3:178952400-178967800 Weak transcription Primary B cells from peripheral blood blood
38 chr3:178952400-178967800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr3:178952400-178971200 Weak transcription Fetal Muscle Trunk muscle
40 chr3:178952400-178971400 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr3:178952400-178978600 Weak transcription Primary neutrophils fromperipheralblood blood
42 chr3:178952600-178967400 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr3:178952600-178967600 Weak transcription Fetal Kidney kidney
44 chr3:178952600-178967800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr3:178952600-178967800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr3:178952600-178976600 Weak transcription Colon Smooth Muscle Colon
47 chr3:178954600-178967200 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr3:178954600-178970800 Weak transcription Primary hematopoietic stem cells blood
49 chr3:178954600-178972400 Weak transcription Fetal Intestine Small intestine
50 chr3:178955000-178965400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015