Variant report
| Variant | rs6790399 |
|---|---|
| Chromosome Location | chr3:155234715-155234716 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:155200800-155251400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 2 | chr3:155210800-155237600 | Weak transcription | Fetal Kidney | kidney |
| 3 | chr3:155218600-155236600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 4 | chr3:155230400-155241000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 5 | chr3:155230600-155241000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 6 | chr3:155230600-155241200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 7 | chr3:155230600-155242800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 8 | chr3:155230600-155243800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 9 | chr3:155230600-155249000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 10 | chr3:155230600-155271400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 11 | chr3:155230800-155235400 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 12 | chr3:155230800-155235400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 13 | chr3:155230800-155238000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 14 | chr3:155230800-155241200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 15 | chr3:155230800-155244400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 16 | chr3:155230800-155248400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 17 | chr3:155231200-155253000 | Weak transcription | A549 | lung |
| 18 | chr3:155231800-155235400 | Weak transcription | NHEK | skin |
| 19 | chr3:155231800-155235600 | Weak transcription | HMEC | breast |
| 20 | chr3:155232200-155236400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 21 | chr3:155232200-155236800 | Strong transcription | Dnd41 | blood |
| 22 | chr3:155232200-155239200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 23 | chr3:155232200-155241000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 24 | chr3:155232200-155241200 | Weak transcription | Esophagus | oesophagus |
| 25 | chr3:155232200-155253000 | Weak transcription | Fetal Intestine Large | intestine |
| 26 | chr3:155232200-155258800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 27 | chr3:155232200-155274000 | Weak transcription | Pancreas | Pancrea |
| 28 | chr3:155232400-155235600 | Weak transcription | Thymus | Thymus |
| 29 | chr3:155232400-155236200 | Weak transcription | Fetal Thymus | thymus |
| 30 | chr3:155232400-155241200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 31 | chr3:155232400-155244000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 32 | chr3:155232400-155247000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 33 | chr3:155232400-155250400 | Weak transcription | Gastric | stomach |
| 34 | chr3:155233800-155235600 | ZNF genes & repeats | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 35 | chr3:155234200-155235000 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 36 | chr3:155234600-155235400 | Strong transcription | Fetal Intestine Small | intestine |
