The 2.0 version of rSNPBase

Variant report

Variant rs6791474
Chromosome Location chr3:179486713-179486714
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:179406200-179503000 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr3:179424400-179487600 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr3:179437400-179490200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr3:179437400-179501800 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr3:179438400-179489200 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr3:179449400-179503400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr3:179450000-179487200 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr3:179450400-179491800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr3:179453200-179507600 Weak transcription NHEK skin
10 chr3:179461000-179487400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr3:179461000-179487800 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr3:179463000-179491800 Weak transcription Spleen Spleen
13 chr3:179463000-179492200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr3:179463600-179492200 Weak transcription Right Atrium heart
15 chr3:179467600-179503200 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr3:179469000-179489000 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr3:179472800-179510200 Weak transcription Psoas Muscle Psoas
18 chr3:179475200-179503200 Weak transcription Fetal Kidney kidney
19 chr3:179476200-179512200 Weak transcription Gastric stomach
20 chr3:179479000-179493400 Weak transcription Esophagus oesophagus
21 chr3:179479000-179502600 Weak transcription Rectal Smooth Muscle rectum
22 chr3:179479000-179506200 Weak transcription Small Intestine intestine
23 chr3:179479200-179489000 Weak transcription Brain Substantia Nigra brain
24 chr3:179479200-179492800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr3:179479200-179493200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr3:179479200-179499400 Weak transcription Thymus Thymus
27 chr3:179479200-179500800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr3:179479400-179488800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr3:179479400-179491800 Weak transcription Fetal Intestine Large intestine
30 chr3:179480200-179492200 Weak transcription Fetal Intestine Small intestine
31 chr3:179482400-179486800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr3:179483200-179489200 Weak transcription Stomach Mucosa stomach
33 chr3:179484000-179487200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr3:179484200-179493200 Weak transcription Pancreas Pancrea
35 chr3:179484600-179493200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr3:179484600-179500000 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr3:179484600-179504400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr3:179484600-179518600 Weak transcription Muscle Satellite Cultured Cells --
39 chr3:179484800-179488000 Weak transcription Fetal Thymus thymus
40 chr3:179484800-179488800 Weak transcription Stomach Smooth Muscle stomach
41 chr3:179484800-179490200 Weak transcription H1 Cell Line embryonic stem cell
42 chr3:179484800-179491800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr3:179484800-179492000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr3:179484800-179492400 Weak transcription Placenta Placenta
45 chr3:179484800-179497800 Weak transcription Primary B cells from peripheral blood blood
46 chr3:179485000-179487600 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr3:179485000-179488600 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr3:179485000-179488800 Weak transcription Aorta Aorta
49 chr3:179485000-179490200 Weak transcription H9 Cell Line embryonic stem cell
50 chr3:179485000-179492000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015