The 2.0 version of rSNPBase

Variant report

Variant rs9872192
Chromosome Location chr3:179475967-179475968
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:179406200-179503000 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr3:179420200-179478800 Weak transcription Rectal Smooth Muscle rectum
3 chr3:179424400-179487600 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr3:179437400-179490200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr3:179437400-179501800 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr3:179438400-179489200 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr3:179441000-179484200 Weak transcription Colon Smooth Muscle Colon
8 chr3:179449400-179503400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr3:179450000-179478400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr3:179450000-179484200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr3:179450000-179487200 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr3:179450400-179483200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr3:179450400-179491800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr3:179451800-179478800 Weak transcription Esophagus oesophagus
15 chr3:179452800-179478600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr3:179452800-179483000 Weak transcription A549 lung
17 chr3:179453200-179507600 Weak transcription NHEK skin
18 chr3:179458200-179483200 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr3:179458400-179483200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr3:179460400-179478800 Weak transcription Pancreas Pancrea
21 chr3:179460800-179478400 Weak transcription Fetal Intestine Large intestine
22 chr3:179460800-179478400 Weak transcription NHDF-Ad bronchial
23 chr3:179460800-179478600 Weak transcription Hela-S3 cervix
24 chr3:179460800-179478600 Weak transcription NH-A brain
25 chr3:179460800-179478800 Weak transcription Brain Substantia Nigra brain
26 chr3:179460800-179478800 Weak transcription Small Intestine intestine
27 chr3:179461000-179476000 Weak transcription Gastric stomach
28 chr3:179461000-179478400 Weak transcription Primary hematopoietic stem cells blood
29 chr3:179461000-179478400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr3:179461000-179478400 Weak transcription Duodenum Mucosa Duodenum
31 chr3:179461000-179478600 Weak transcription Brain Inferior Temporal Lobe brain
32 chr3:179461000-179483000 Weak transcription Brain Angular Gyrus brain
33 chr3:179461000-179487400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr3:179461000-179487800 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr3:179461200-179477800 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr3:179461200-179478400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr3:179461400-179476000 Weak transcription Fetal Thymus thymus
38 chr3:179461400-179478600 Weak transcription Primary T cells fromperipheralblood blood
39 chr3:179461600-179478600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr3:179462000-179484200 Weak transcription Muscle Satellite Cultured Cells --
41 chr3:179462800-179478400 Weak transcription H1 Cell Line embryonic stem cell
42 chr3:179463000-179478400 Weak transcription Lung lung
43 chr3:179463000-179478800 Weak transcription Fetal Intestine Small intestine
44 chr3:179463000-179479000 Weak transcription Thymus Thymus
45 chr3:179463000-179481800 Weak transcription Aorta Aorta
46 chr3:179463000-179491800 Weak transcription Spleen Spleen
47 chr3:179463000-179492200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr3:179463200-179478600 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr3:179463200-179478800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr3:179463200-179479000 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015