Variant report

Variant	rs67970726
Chromosome Location	chr14:39668219-39668220
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:39666993..39668682-chr14:39671014..39673008,3	K562	blood:

Extended variants
information (count: 54 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:51)

rs_ID	r²[population]
rs10483540	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs45469295	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs45469795	0.83[EUR][1000 genomes]
rs45540035	0.81[EUR][1000 genomes]
rs55706043	1.00[ASN][1000 genomes]
rs55790340	0.83[EUR][1000 genomes]
rs55880223	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55918207	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55981737	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55987939	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55997577	0.81[EUR][1000 genomes]
rs56032918	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56074634	0.83[EUR][1000 genomes]
rs56103446	0.81[EUR][1000 genomes]
rs56125789	0.81[EUR][1000 genomes]
rs56182546	1.00[ASN][1000 genomes]
rs56225465	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56225696	0.96[EUR][1000 genomes]
rs56276842	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56282196	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56335002	0.83[EUR][1000 genomes]
rs56404404	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57248532	1.00[ASN][1000 genomes]
rs59418195	0.87[EUR][1000 genomes]
rs6571907	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67808375	0.83[EUR][1000 genomes]
rs7147914	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72671372	0.81[EUR][1000 genomes]
rs72671379	0.81[EUR][1000 genomes]
rs72671382	0.81[EUR][1000 genomes]
rs72671387	0.81[EUR][1000 genomes]
rs72671398	0.81[EUR][1000 genomes]
rs72671400	0.81[EUR][1000 genomes]
rs72673314	0.81[EUR][1000 genomes]
rs72673315	0.83[EUR][1000 genomes]
rs72673316	0.83[EUR][1000 genomes]
rs72673317	0.83[EUR][1000 genomes]
rs72673318	0.81[EUR][1000 genomes]
rs72673328	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72673329	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72673339	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72673340	0.85[EUR][1000 genomes]
rs72673346	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72673350	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72673357	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72673359	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72673379	1.00[ASN][1000 genomes]
rs72673381	1.00[ASN][1000 genomes]
rs72673384	1.00[ASN][1000 genomes]
rs72673387	1.00[ASN][1000 genomes]
rs72673388	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1246	chr14:39656597-39701520	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Strong transcription	TF binding region Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv1053133	chr14:39657535-39770729	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
3	nsv974270	chr14:39664152-39680061	Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:39654400-39672000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr14:39658000-39672400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr14:39668200-39673000	Weak transcription	H1 Cell Line	embryonic stem cell

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