Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10025670	0.92[EUR][1000 genomes]
rs12644052	0.95[EUR][1000 genomes]
rs16858552	0.92[EUR][1000 genomes]
rs1872707	0.95[EUR][1000 genomes]
rs2349126	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4308401	0.95[EUR][1000 genomes]
rs4320171	1.00[EUR][1000 genomes]
rs4345223	0.95[EUR][1000 genomes]
rs4356942	0.95[EUR][1000 genomes]
rs4359946	0.95[EUR][1000 genomes]
rs4434289	0.95[EUR][1000 genomes]
rs4482803	0.95[EUR][1000 genomes]
rs4492036	0.95[EUR][1000 genomes]
rs4541547	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4694803	0.95[EUR][1000 genomes]
rs4694804	0.92[EUR][1000 genomes]
rs4695099	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4695101	0.95[EUR][1000 genomes]
rs4695109	0.95[EUR][1000 genomes]
rs6447448	1.00[EUR][1000 genomes]
rs6844212	0.95[EUR][1000 genomes]
rs7654664	0.95[EUR][1000 genomes]
rs7686726	0.95[EUR][1000 genomes]
rs9995467	0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv594104	chr4:45105210-45665828	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv594107	chr4:45338240-45436394	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:45403800-45416800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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