Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10025670	0.97[EUR][1000 genomes]
rs12644052	1.00[EUR][1000 genomes]
rs16858512	0.87[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs16858552	0.97[EUR][1000 genomes]
rs1872707	1.00[EUR][1000 genomes]
rs2349126	0.95[EUR][1000 genomes]
rs4308401	1.00[EUR][1000 genomes]
rs431339	0.83[EUR][1000 genomes]
rs4320171	0.95[EUR][1000 genomes]
rs4345223	1.00[EUR][1000 genomes]
rs4359946	1.00[EUR][1000 genomes]
rs4434289	1.00[EUR][1000 genomes]
rs4482803	1.00[EUR][1000 genomes]
rs4492036	1.00[EUR][1000 genomes]
rs4541547	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4694803	1.00[EUR][1000 genomes]
rs4694804	0.97[EUR][1000 genomes]
rs4694805	1.00[ASN][1000 genomes]
rs4695099	0.95[EUR][1000 genomes]
rs4695101	1.00[EUR][1000 genomes]
rs4695109	1.00[EUR][1000 genomes]
rs6447448	0.95[EUR][1000 genomes]
rs6813294	0.95[EUR][1000 genomes]
rs6844212	1.00[EUR][1000 genomes]
rs7654664	1.00[EUR][1000 genomes]
rs7686726	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9995467	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv594104	chr4:45105210-45665828	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv594107	chr4:45338240-45436394	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:45347600-45349400	Enhancers	Stomach Mucosa	stomach
2	chr4:45348000-45352000	Weak transcription	Brain Substantia Nigra	brain
3	chr4:45348600-45349400	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr4:45348600-45349400	Enhancers	iPS-20b Cell Line	embryonic stem cell
5	chr4:45348800-45349400	Enhancers	H1 Cell Line	embryonic stem cell
6	chr4:45349000-45349400	Enhancers	ES-I3 Cell Line	embryonic stem cell

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