Variant report

Variant	rs6830995
Chromosome Location	chr4:56060174-56060175
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10034873	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs10212910	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs11936413	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17085320	1.00[EUR][1000 genomes]
rs17085340	1.00[EUR][1000 genomes]
rs17085382	1.00[EUR][1000 genomes]
rs17085431	1.00[EUR][1000 genomes]
rs28431274	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs28534637	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs28579065	1.00[EUR][1000 genomes]
rs28585443	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs28664865	1.00[EUR][1000 genomes]
rs28730308	1.00[EUR][1000 genomes]
rs41520946	1.00[EUR][1000 genomes]
rs57190330	1.00[EUR][1000 genomes]
rs58047235	1.00[EUR][1000 genomes]
rs6554272	1.00[EUR][1000 genomes]
rs6835587	1.00[EUR][1000 genomes]
rs6836091	1.00[EUR][1000 genomes]
rs6836729	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6839741	1.00[EUR][1000 genomes]
rs6843015	1.00[EUR][1000 genomes]
rs6848437	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73149762	1.00[EUR][1000 genomes]
rs7656132	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7664999	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7673410	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7683735	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7693155	1.00[EUR][1000 genomes]
rs9312659	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv526344	chr4:55522488-56231119	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
2	esv3422020	chr4:56059395-56063993	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:56055000-56060800	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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