Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10033902	1.00[ASN][1000 genomes]
rs11734680	1.00[ASN][1000 genomes]
rs11735485	1.00[ASN][1000 genomes]
rs13115210	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13130715	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13138940	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1506555	1.00[ASN][1000 genomes]
rs17786141	0.96[EUR][1000 genomes]
rs1848057	1.00[ASN][1000 genomes]
rs1995627	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs35080385	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs35111270	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs36026769	1.00[ASN][1000 genomes]
rs4834005	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5005646	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62322130	1.00[ASN][1000 genomes]
rs62322133	1.00[ASN][1000 genomes]
rs62322135	1.00[ASN][1000 genomes]
rs62323260	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62323270	0.95[EUR][1000 genomes]
rs62323300	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6813200	0.91[EUR][1000 genomes]
rs6814312	1.00[ASN][1000 genomes]
rs6820187	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6820944	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6821373	1.00[ASN][1000 genomes]
rs6832445	1.00[ASN][1000 genomes]
rs6857612	1.00[ASN][1000 genomes]
rs7675382	0.96[EUR][1000 genomes]
rs7687072	1.00[ASN][1000 genomes]
rs7696597	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1011752	chr4:125708756-125932456	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Genic enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv1001338	chr4:125708756-126103293	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv830050	chr4:125717858-125888563	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs6838658	ANKRD50	cis	Artery Tibial	GTEx

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:125784000-125788400	Weak transcription	HSMMtube	muscle
2	chr4:125784400-125787400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr4:125784400-125788000	Weak transcription	Osteobl	bone
4	chr4:125787000-125787400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr4:125787200-125790000	Enhancers	Muscle Satellite Cultured Cells	--
6	chr4:125787200-125791600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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